Index

A

add() (sed.core.metadata.MetaHandler method) (sed.dataset.dataset.DatasetsManager static method) add_attribute() (sed.core.SedProcessor method) add_delay_offset() (sed.core.SedProcessor method) add_energy_offset() (sed.core.SedProcessor method) add_features() (sed.calibrator.momentum.MomentumCorrector method) add_jitter() (sed.core.SedProcessor method) add_offsets() (sed.calibrator.delay.DelayCalibrator method) (sed.calibrator.energy.EnergyCalibrator method) add_ranges() (sed.calibrator.energy.EnergyCalibrator method) add_time_stamped_data() (in module sed.core.dfops) (sed.core.SedProcessor method) adjust_energy_correction() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) adjust_ranges() (sed.calibrator.energy.EnergyCalibrator method) align_dld_sectors() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) append_delay_axis() (sed.calibrator.delay.DelayCalibrator method)

append_energy_axis() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) append_k_axis() (sed.calibrator.momentum.MomentumCorrector method) append_tof_ns_axis() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) apply_correction() (sed.calibrator.momentum.MomentumCorrector method) apply_corrections() (sed.calibrator.momentum.MomentumCorrector method) apply_dfield() (in module sed.calibrator.momentum) apply_energy_correction() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) apply_filter() (in module sed.core.dfops) apply_jitter() (in module sed.core.dfops) apply_momentum_calibration() (sed.core.SedProcessor method) apply_momentum_correction() (sed.core.SedProcessor method) attributes (sed.core.SedProcessor property) available (sed.dataset.dataset.Dataset property) available_channels (sed.loader.flash.loader.FlashLoader property) (sed.loader.sxp.loader.SXPLoader property)

B

backward_fill_lazy() (in module sed.core.dfops) BaseLoader (class in sed.loader.base.loader) bin_and_load_momentum_calibration() (sed.core.SedProcessor method) bin_centers_to_bin_edges() (in module sed.binning.utils) bin_data() (sed.calibrator.energy.EnergyCalibrator method) bin_dataframe() (in module sed.binning)

bin_edges_to_bin_centers() (in module sed.binning.utils) bin_partition() (in module sed.binning) binned (sed.core.SedProcessor property) binsearch() (in module sed.binning.numba_bin) buffer_file_handler() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method)

C

calc_geometric_distances() (sed.calibrator.momentum.MomentumCorrector method) calc_inverse_dfield() (sed.calibrator.momentum.MomentumCorrector method) calc_symmetry_scores() (sed.calibrator.momentum.MomentumCorrector method) calibrate() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) calibrate_delay_axis() (sed.core.SedProcessor method) calibrate_energy_axis() (sed.core.SedProcessor method) calibrate_momentum_axes() (sed.core.SedProcessor method) cleanup_oldest_scan() (sed.loader.mirrorutil.CopyTool method) cm2palette() (in module sed.calibrator.momentum) complete_dictionary() (in module sed.core.config) compute() (sed.core.SedProcessor method) concatenate_channels() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) config (sed.core.SedProcessor property) coordinate_transform() (sed.calibrator.momentum.MomentumCorrector method) copy() (sed.loader.mirrorutil.CopyTool method) CopyTool (class in sed.loader.mirrorutil) correction_function() (in module sed.calibrator.energy)

cpy() (sed.core.SedProcessor method) create_buffer_file() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_dataframe_per_channel() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_dataframe_per_electron() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_dataframe_per_file() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_dataframe_per_pulse() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_dataframe_per_train() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_multi_index_per_electron() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_multi_index_per_pulse() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) create_numpy_array_per_channel() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method)

D

data_name (sed.dataset.dataset.Dataset property) dataframe (sed.core.SedProcessor property) Dataset (class in sed.dataset.dataset) DatasetsManager (class in sed.dataset.dataset) define_features() (sed.core.SedProcessor method)

DelayCalibrator (class in sed.calibrator.delay) detector_coordinates_2_k_coordinates() (in module sed.calibrator.momentum) dictmerge() (in module sed.calibrator.momentum) drop_column() (in module sed.core.dfops) dup (sed.calibrator.energy.EnergyCalibrator property) DuplicateEntryError

E

EnergyCalibrator (class in sed.calibrator.energy) existing_data_paths (sed.dataset.dataset.Dataset property)

extract_bias() (in module sed.calibrator.energy) extract_delay_stage_parameters() (in module sed.calibrator.delay)

F

feature_extract() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) feature_select() (sed.calibrator.momentum.MomentumCorrector method) features (sed.calibrator.momentum.MomentumCorrector property) FILENAME (sed.dataset.dataset.DatasetsManager attribute) files (sed.core.SedProcessor property) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) (sed.loader.sxp.loader.SXPLoader attribute)

filter_column() (sed.core.SedProcessor method) find_bias_peaks() (sed.core.SedProcessor method) find_correspondence() (in module sed.calibrator.energy) find_nearest() (in module sed.calibrator.energy) fit_energy_calibration() (in module sed.calibrator.energy) FlashLoader (class in sed.loader.flash.loader) forward_fill_lazy() (in module sed.core.dfops)

G

gather_calibration_metadata() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) gather_correction_metadata() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) gather_files() (in module sed.loader.utils) gather_metadata() (sed.loader.mpes.loader.MpesLoader method) (sed.loader.sxp.loader.SXPLoader method) generate_inverse_dfield() (in module sed.calibrator.momentum) generate_splinewarp() (sed.core.SedProcessor method) GenericLoader (class in sed.loader.generic.loader) get() (sed.dataset.dataset.Dataset method) get_archiver_data() (in module sed.loader.mpes.loader) get_attribute() (in module sed.loader.mpes.loader) get_channels() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) get_count_rate() (in module sed.loader.mpes.loader) (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) (sed.loader.sxp.loader.SXPLoader method)

get_elapsed_time() (in module sed.loader.mpes.loader) (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) (sed.loader.sxp.loader.SXPLoader method) get_files_from_run_id() (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) (sed.loader.sxp.loader.SXPLoader method) get_groups_and_aliases() (in module sed.loader.mpes.loader) get_loader() (in module sed.loader.loader_interface) get_metadata() (sed.loader.flash.metadata.MetadataRetriever method) get_names_of_all_loaders() (in module sed.loader.loader_interface) get_normalization_histogram() (sed.core.SedProcessor method) get_start_and_end_time() (sed.loader.mpes.loader.MpesLoader method) get_target_dir() (in module sed.loader.mirrorutil) grid_histogram() (in module sed.diagnostics)

H

hdf5_to_array() (in module sed.loader.mpes.loader) hdf5_to_dataframe() (in module sed.loader.mpes.loader)

hdf5_to_timed_array() (in module sed.loader.mpes.loader) hdf5_to_timed_dataframe() (in module sed.loader.mpes.loader)

I

initialize_paths() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method)

J

json_path (sed.dataset.dataset.DatasetsManager attribute)

L

load() (sed.core.SedProcessor method) load_bias_series() (sed.core.SedProcessor method) load_config() (in module sed.core.config) load_data() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) load_datasets_dict() (sed.dataset.dataset.DatasetsManager static method) load_dfield() (in module sed.calibrator.momentum)

load_h5() (in module sed.io) load_tiff() (in module sed.io) LOADER (in module sed.loader.base.loader) (in module sed.loader.flash.loader) (in module sed.loader.generic.loader) (in module sed.loader.mpes.loader) (in module sed.loader.sxp.loader)

M

map_columns_2d() (in module sed.core.dfops) metadata (sed.core.metadata.MetaHandler property) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) (sed.loader.sxp.loader.SXPLoader attribute) MetadataRetriever (class in sed.loader.flash.metadata) MetaHandler (class in sed.core.metadata) mm_to_ps() (in module sed.calibrator.delay) module sed.binning sed.binning.numba_bin sed.binning.utils sed.calibrator.delay sed.calibrator.energy sed.calibrator.momentum sed.core sed.core.config sed.core.dfops sed.core.metadata sed.dataset.dataset sed.diagnostics sed.io sed.loader.base.loader sed.loader.flash.loader sed.loader.flash.metadata sed.loader.generic.loader sed.loader.loader_interface sed.loader.mirrorutil sed.loader.mpes.loader sed.loader.sxp.loader sed.loader.utils

MomentumCorrector (class in sed.calibrator.momentum) MpesLoader (class in sed.loader.mpes.loader) mycopy() (in module sed.loader.mirrorutil) mymakedirs() (in module sed.loader.mirrorutil)

N

NAME (sed.dataset.dataset.DatasetsManager attribute) normalization_histogram (sed.core.SedProcessor property) normalize() (sed.calibrator.energy.EnergyCalibrator method) normalized (sed.core.SedProcessor property)

normspec() (in module sed.calibrator.energy) nranges (sed.calibrator.energy.EnergyCalibrator property) ntraces (sed.calibrator.energy.EnergyCalibrator property) numba_histogramdd() (in module sed.binning.numba_bin)

O

offset_by_other_columns() (in module sed.core.dfops)

P

parquet_handler() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) parse_config() (in module sed.core.config) parse_h5_keys() (in module sed.loader.utils) parse_metadata() (sed.loader.flash.loader.FlashLoader method) peakdetect1d() (in module sed.calibrator.energy)

peaksearch() (in module sed.calibrator.energy) plot_single_hist() (in module sed.diagnostics) poly_energy_calibration() (in module sed.calibrator.energy) pose_adjustment() (sed.calibrator.momentum.MomentumCorrector method) (sed.core.SedProcessor method) pre_binning() (sed.core.SedProcessor method)

R

range_convert() (in module sed.calibrator.energy) read_dataframe() (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) (sed.loader.sxp.loader.SXPLoader method) remove() (sed.dataset.dataset.Dataset method) (sed.dataset.dataset.DatasetsManager static method)

reset_deformation() (sed.calibrator.momentum.MomentumCorrector method) reset_multi_index() (sed.loader.flash.loader.FlashLoader method) (sed.loader.sxp.loader.SXPLoader method) runs (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) (sed.loader.sxp.loader.SXPLoader attribute)

S

save() (sed.core.SedProcessor method) save_config() (in module sed.core.config) save_delay_calibration() (sed.core.SedProcessor method) save_delay_offsets() (sed.core.SedProcessor method) save_energy_calibration() (sed.core.SedProcessor method) save_energy_correction() (sed.core.SedProcessor method) save_energy_offset() (sed.core.SedProcessor method) save_momentum_calibration() (sed.core.SedProcessor method) save_splinewarp() (sed.core.SedProcessor method) save_transformations() (sed.core.SedProcessor method) save_workflow_params() (sed.core.SedProcessor method) sed.binning module sed.binning.numba_bin module sed.binning.utils module sed.calibrator.delay module sed.calibrator.energy module sed.calibrator.momentum module sed.core module sed.core.config module sed.core.dfops module sed.core.metadata module sed.dataset.dataset module sed.diagnostics module

sed.io module sed.loader.base.loader module sed.loader.flash.loader module sed.loader.flash.metadata module sed.loader.generic.loader module sed.loader.loader_interface module sed.loader.mirrorutil module sed.loader.mpes.loader module sed.loader.sxp.loader module sed.loader.utils module SedProcessor (class in sed.core) select_k_range() (sed.calibrator.momentum.MomentumCorrector method) select_slice() (sed.calibrator.momentum.MomentumCorrector method) select_slicer() (sed.calibrator.momentum.MomentumCorrector method) simplify_binning_arguments() (in module sed.binning.utils) size() (sed.loader.mirrorutil.CopyTool method) spline_warp_estimate() (sed.calibrator.momentum.MomentumCorrector method) split_channel_bitwise() (in module sed.loader.utils) split_dld_time_from_sector_id() (in module sed.loader.utils) supported_file_types (sed.loader.base.loader.BaseLoader attribute) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) (sed.loader.sxp.loader.SXPLoader attribute) SXPLoader (class in sed.loader.sxp.loader) symscores (sed.calibrator.momentum.MomentumCorrector property)

T

timed_dataframe (sed.core.SedProcessor property) to_h5() (in module sed.io) to_nexus() (in module sed.io)

to_tiff() (in module sed.io) tof2ev() (in module sed.calibrator.energy) tof2evpoly() (in module sed.calibrator.energy) tof2ns() (in module sed.calibrator.energy)

U

update_deformation() (sed.calibrator.momentum.MomentumCorrector method)

V

view() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method)

view_event_histogram() (sed.core.SedProcessor method)